Repository of amyloid diffraction images and analysis tool

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Welcome to the UCLA repository of amyloid diffraction images and analysis tool

About the server

Amyloids are linear aggregates of protein that are found in certain disease states such Alzheimer's disease, Huntington's disease and others. Several characteristics are diagnostic for amyloid including unbranches fiber morphology and binding of the particular dyes Congo Red or Thiaflavin T. Perhaps the most important diagnostic feature is a cross-beta diffraction pattern from X-ray diffraction of aligned fibers.

Although many amyloid fibers have been characterized by fiber diffraction, to this point, no one has undertaken a comparative anaylsis of the diffraction characteristics and no single repository exists for all of the diffraction patterns taken of amyloid.

This server converts existing amyloid fiber diffractions to a common scale and deposits the scaled information in an accessible repository in order to allow comparison and analysis of the diffraction patterns.

Upload a diffraction pattern to the server

Please enter your information
Name
First: Last:
Email:
Institution:
Name of protein
Protein state
Number of residues
Conditions
Disease
Please enter the amino acid sequence (FASTA format) of the subject
Please enter any coordinates for a structure
PDB id:
Please enter any relevant publications
Please separate each entry by a blank, empty line

Select file

Please use an image in .gif or .jpg format.
Note: It is best to use a clean (free of arrows or text) image, however, a custom zone can be specified if no clean image is available.