NIH MBI Laboratory for Structural Genomics and Proteomics

DPANN: Querie Form

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DPANN Sequence to Structure Alignment

Supplemental Information Download

The subset of DAPS alignments used. (Please righ-click and choose "Save link target as...")
The ANN-derived substitution matrix. (Please righ-click and choose "Save link target as...")

Figure S1 (visual comparision of the differences between the ANN and log-odds derived substitution matrices).

A web-interface to access the DPANN alignment program is available at the following URL: http://nihserver.mbi.ucla.edu/cgi-bin/DPANN/

A detailed description of the algorithm can be found in the following paper:
Reinhardt, A. and Eisenberg, D. (2004): "DPANN: Improved Sequence to Structure Alignments Following Fold Recognition."; PROTIENS: Structure, Function and Bioinformatics; in Press;

Last modified 04/01/2004