Contact Prediction Server

This page implements the contact prediction method described in:

Using inferred residue contacts to distinguish between correct and incorrect protein models.
Christopher S. Miller and David Eisenberg
Bioinformatics 2008 24(14):1575-1582 (doi:10.1093/bioinformatics/btn248)
[PubMed] [Bioinformatics OpenAccess]


January 4, 2011: The server is back up again after a change in our cluster software temporarily caused some trouble. As always, please let me know if there are problems via the contact link at upper right.

Upload your multiple sequence alignment here

(most common alignment formats are supported; gzipped files are also accepted):

Notes about multiple sequence alignments


Download the source code of the software to run locally here